Dr. K. K. Chaturvedi

Name

Dr. K. K. Chaturvedi
Completed

1.       Computational identification and modelling of genetic variation in relation to performance traits in buffaloes.

2.       Microbial domain research projects on computational aspects.

3.       RiceMetaSys: Understanding rice gene network for blast resistance and drought tolerance through system biology approach.

4.       Gene Regulatory Networks Modelling For Heat Stress Responses of Source and Sink for Development of Climate Smart Wheat .

5.       Exploring Gene Regulatory Networks involved in Heat Stress Responses of Source and Sink for Development of Climate Smart Wheat (In collaboration with ICAR-IARI, New Delhi)

  1. Platform for Integrated Genomics Warehouse
    Research projects (Four Sub projects) under Centre for Agricultutral Bioinformatics (CABin) Scheme “Agricultural Bioinformatics and Computational Biology” funded by ICAR, New Delhi
  2. Computational and Analytical Solutions for High-throughput Biological Data under ICAR Consortium Research Platform on Genomics
  3. Development of a Tool for Comparison of Protein 3D Structure using graph theoretic approach
  4. Establishment of National Agricultural Bioinformatics Grid in ICAR . Funded by NAIP
  5. Visioning Policy Analysis and Gender (VPAGe). Funded by NAIP: (a) Technology Forecasting and (b) Market Intelligence
  6. Risk Assessment and Insurance products in Agriculture. Funded by NAIP
  7. E-learning solution for Agricultural Education in India
  8. Development of Knowledge Data Warehouse for Agricultural Research
  9. National Information System for Agricultural Education Network in India (Nisagenet)
  10. Strengthening, Refining and Implementation of Expert System on Wheat Crop Management
  11. Assessment of Post harvest Losses of Crops/Commodities. Funded by AICRP Project.
  12. National Information System for Agricultural Education Network in India (Nisagenet). Funded by AP-Cess, ICAR.
  13. Development of Expert System on Wheat Crop Management (EXOWHEM)
  14. Integrated National Agricultural Resources Information System (INARIS) NATP- Mission mode project.
E-mail

kk[dot]chaturvedi[at]icar[dot]gov[dot]in
Designation

Principal Scientist
Awards
  1. Fellowship Award, Society for Scientific Development in Agriculture and Technology, Meerut (UP) India in 2013.
  2. Scientist of the Year Award, Society for Recent Development in Agriculture on the occasion of National Symposium on “Scenario of Agriculture in Changing Climatic Conditions” held on Oct 18, 2008 at SVBP University of Agriculture & Technology, Meerut.
  3. South Asia Manthan Award, Project “Expert System on Wheat Crop Management” by Digital Empowerment Foundation in 2009.
  4. Praise-Reward for Excellent Performance under ICAR Institute Category for the stall of “Computer Application, IASRI” in Krishi Vigyan Mela at IARI New Delhi during 4-6 March 2010.
  5. Appreciation letter from DDG (Agricultutral Engineering) for the contributions made as a team member in the Data warehouse project “Integrated National Agricultural Resources Information System” in 2005.
  6. First prize in the poster pratiyogita for Paper entitled “Expert system for selection of wheat varieties in Hindi” at IASRI, New Delhi on 12th Sept 2009.
  7. Membership certificate of honours for valued reviewer from International Jounral of Bioinformatics Research on 15th June 2017.
  8. Session Chair, Software Engineering and Testing of 5th International Conference on Reliability, Infocom Technologies and. Optimization (ICRITO 2016). (Trends and Future directions) during 7-9th Sep. 2016 at AIIT, Amity University, Noida.
    Session Chair, IT Applications of 4th International Conference on Reliability, Infocom Technologies and. Optimization (ICRITO 2015). (Trends and Future directions) during 2-4th Sep. 2015 at AIIT, Amity University, Noida.
  9. Dual Faculty Member in the disciplines of Computer Applications and Bioinformatics at PG School, ICAR-IARI, New Delhi.
  10. Invited speaker for many talks and delivered lectures outside and within the Institute.
Articles
  1. 1.    U. B. Angadi, K. K. Chaturvedi, S. Srivastava and Rai Anil. “A Novel Way of Comparing Protein 3D Structure Using Graph Partitioning Approach,” in IEEE/ACM Transactions on Computational Biology and Bioinformatics.

2.       Farooqi Mohammad Samir, Mishra DC, Chaturvedi KK, Rai Anil, Lal SB, Kumar Sanjeev, Bhati Jyotika and Sharma Anu. (2019) A Review on Recent Statistical Models for RNA-Seq. Journal of Applied Bioinformatics & Computational Biology. 8:1 DOI: 10.4172/2329-9533.1000162.

3.       Budhlakoti Neeraj, Mishra Dwijesh Chandra, Rai Anil, Lal S. B., Chaturvedi KK, Kumar Rajeev Ranjan (2019). A Comparative Study of Single Trait and Multi-Trait Genomic Selection. Journal of Computational Biology. Vol 26, pg 1-13.

4.       Jerome A, Bhati J, Mishra DC, Chaturvedi KK, Rao AR, Rai A, Sikka P, Singh I (2019). MicroRNA-related markers associated with corpus luteum tropism in buffalo (Bubalus bubalis). Genomics

5.       Sureshkumar V, Dutta Bipratip, Kumar Vishesh, Prakash G, Mishra Dwijesh C, Chaturvedi KK, Rai Anil, Sevanthi Amitha Mithra, Solanke Amolkumar U (2019). RiceMetaSysB: a database of blast and bacterial blight responsive genes in rice and its utilization in identifying key blast-resistant WRKY genes. Database.

6.       Islam, S., Sharma, A.K., Sharma, K., Farooqi, M.S.,Chaturvedi, K.K. (2018). Diagnosing wheat disease using expert system. Journal of the Indian Society of Agricultural Statistics. 72(3):255-259.

7.       Mishra Dwijesh Chandra *, Kumar Sanjeev, Lal SB, Saha Arijit, Chaturvedi KK, Budhlakoti Neeraj and Rai Anil (2018). TAGPT: A Web Server for Prediction of Trait Associated Genes using Gene Expression Data. Annals of Genetics and Genetic Disorders. 1(1): 1003.

 

8.       अनुशर्मा, ज्योतिकाभाटी, शशिभूषणलाल, कृष्णकुमारचतुर्वेदी, मोहम्मदसमीरफ़ारूकीऔरअनिलराय (2018). संगणनात्मकविधियोंकेद्वाराअरहरमेंमाइक्रो–आर.एन.ए. कीपहचानएवंउसकाविवरण, भारतीयकृषिअनुसंधानपत्रिका, 33(1), 51-57.

9.       Hukam C. Rawal, S. V. Amitha Mithra, Kirti Arora, Vishesh Kumar, Neha Goel, Dwijesh Chandra Mishra, K. K. Chaturvedi, Anil Rai, S. Vimala Devi, T. R. Sharma and Amolkumar U. Solanke (2018) . Genome-Wide Analysis in Wild and Cultivated Oryza Species Reveals Abundance of NBS Genes in Progenitors of Cultivated Rice. Plant Molecular Biology Reporter. Pages 1-14.

10.    Kumar A, Farooqi MS, Mishra DC, Kumar S, Rai A, Chaturvedi KK, Lal SB, Sharma, A. (2018). Prediction of miRNA and Identification of their Relationship Network Related to Late Blight Disease of Potato. Microrna. 7(1):11-19. doi: 10.2174/2211536607666171213123038. PubMed PMID: 29237394

  1. Mishra, DC, Smita, S, Singh I, Devi, MN, Kumar S, Farooqi, MS, Chaturvedi, KK, Rai, A (2017). Prediction of novel putative miRNAs and their targets in buffalo. Indian Journal of Animal Sciences , 87(1), 59–63.
  2. Himanshu, Chaturvedi, KK, Bandopadhyay, A and Jain, S (2017). PATRICIA Trie based Time and Memory Optimization for fast Network Motif Search. Indian Journal of Animal Sciences. 87(4):512-519.
  3. Islam, S, Sharma, RK, Chhokar, RS, Dhar, S, Sabir, N, Chaturvedi,KK Singh, R, Farooqi, MS and Sharma, K (2017). Expert system for the identification and control of weeds in wheat crop. Annals of Agricultural Research, New Series. 38(2):1-9
  4. Srivastava,S, Lal, SB, Mishra, DC, Angadi, UB, Chaturvedi, KK , Rai, SN and Rai, A (2016). An efficient algorithm for protein structure comparison using elastic shape analysis. Algorithms for Molecular Biology. 11-27. DOI: 10.1186/s13015-016-0089-1.[SCI-Thomson Reutors: 1.439].
  5. Patil, VU, Vanishree, G, Hegde, V, Chaturvedi, KK and Chakrabarti, SK (2016). Computational Analysis of Short Tandem Repeat (STR) Markers from Genome Wide Expression Regions of Sugar Beet (Beeta vulgaris). Journal of Applied Bioinformatics and Computational Biology, 5:1. doi: 10.4172/2329-9533.1000125.
  6. Farooqi, MS, Mishra, DC, Rai, N, Singh, DP, Rai, A, Chaturvedi, KK, Prabha, R and Kaur, M (2016). Genome-wide relative analysis of codon usage bias and codon context pattern in the bacteria Salinibacter ruber, Chromohalobacter salexigens and Rhizobium etli. Biochemistry and Analytical Biochemistry. 5:257. doi:10.4172/2161-1009.1000257.
  7. Patil,VU, Vanishree, G, Kardile, HB, Jindal, V, Dutta, SK, Chaturvedi, KK and Chakrabarti, SK (2016). In Silico Analysis of Genome wide microsatellite DNA marker in Coffee (Coffea arabica L.). International Journal of Computational Bioinformatics and In Silico Modeling. 5(3):815-818.
  8. Singh, BK, Mishra, DC, Yadav, S, Supriya, A, Era, V, Tribhuvan, KU, Kumar, A, Kumar, S, Kumar, S, Chaturvedi, KK, Rani R, Yadav P, Rai, A, Rai, PK, Singh, VV, Singh, D (2016). Identification, characterization, validation and cross-species amplification of genic-SSRs in Indian Mustard (Brassica juncea). Journal of Plant Biochemistry and Biotechnology. DOI:10.1007/s13562-016-0353-y.
  9. Singh, VB, Chaturvedi, KK, Khatri, SK and Kumar, V (2015). Bug prediction modeling using complexity of code changes. International Journal of System Assurance and Engineering Management, 6(1):44-60.
  10. Sharma, N, Farooqi, MS, Chaturvedi, KK, Lal, SB, Grover, M, Rai, A, and Pandey, P (2014). The Halophile Protein Database, Database (Oxford). 2014; doi:10.1093/database/bau114.
  11. Farooqi, Ms, Sanjkta, RK, Mishra, DC, Singh, DP, Rai, A, Chaturvedi, KK,Sharma, N(2014). In slico Analysis of Synonymous Codon Usage Pattern of Rhizobium etili CFn 42. Proceedings of the National Academy of Sciences, India, Section B: Biological Science.1007/s40011-014-0457-x. [NAAS Rating :6.4].
  12. Chaturvedi, KK, Kapur, PK, Anand, S, and Singh,VB (2014). Predicting the complexity of codechanges using entropy based measures. International Journal of System Assurance and Engineering Management, 5(2): 155-164.
  13. Chaturvedi, KK and Singh, VB(2013). Bug prediction using entropy based measures. International Journal Knowledge Engineering and Data Mining, 2(4): 266-291.
  14. Lal, SB, Pandey, Pankaj, K, Rai, Punit K, Rai, Anil, Sharma, Anu and Chaturvedi, KK (2013). Designand development of portal for biological database in agriculture. Bioinformation, 9(11): 588-598.
  15. Kumar, V, Singh, KH, Chaturvedi, KK and Nanjundan, J (2013). Design and implementationof web-based database of rapeseed-mustardgermplasm using Linux – Apache – MySQL – PHP(LAMP) technology. African Journal of Agricultural Research, 8(22): 2733-2743.
  16. Sanjukta, RK, Farooqi, MS, Sharma, N, Rai, N, Mishra, DC, Rai, A, Singh, DP, Chaturvedi, KK (2013). Statistical Analysis of codon usage in extremely halophilic bacterium, Salinibacter ruber DSM 13855. Online Journal of Bioinformatics, 14(1): 15-31.
  17. Sanjukta, RK, Farooqi, MS, Rai, Anil, Mishra DC, Sharma, NK, Chaturvedi, KK (2013). Statistical and computational methods for detection of synonymous codon usage patterns and gene expression. International Journal of Agricultural and Statistical Sciences, 9(1), June 2013.
  18. Dahiya, S, Chaturvedi, KK,Jaggi, S, Bhardwaj, A, Varghese, C. (2012). A Digital Eduction Initiative in Agriculture. Journal of Farming Systems Research and Development ,, 18(2): 175-179.
  19. Dahiya, S, Jaggi, S, Chaturvedi, KK, Bhardwaj, A, Goyal, RC, Varghese, C (2012). An eLearning System for Agricultural Education. Indian Journal of Extension Education, 12(3): 132-135.
  20. Islam, S, Kundu, S, Shoran, S, Sabir, N, Sharma, K, Farooqi, S, Singh, R, Agarwal, HO, Chaturvedi, KK, Shrama, RK, Sharma, AK (2012). Selection of Wheat (triticum aestivum) Variety through Expert System. Indian Journal of Agricultural Sciences, 82(1): 39-43.
  21. Chaturvedi, KK , Singh, VB (2012). An Empirical Comparison of Machine Learning Techniques in Predicting the Bug Severity of Open and Closed Source Projects. International Journal of Open Source Software and Processes (IJOSSP), 4(2): 32-59.
  22. Singh, VB, Chaturvedi, KK (2011). Bug Tracking and Reliability Assessment System (BTRAS). International Journal of Software Engineering and Its Applications, 5(4): 17-30.
  23. Chaturvedi, KK, Rai, A, Dubey, VK, and Malhotra, PK (2008). On-line Analytical Processing in Agriculture using Multi-dimensional cubes. Journal of Indian Society of Agricultural Statistics, 62(1): 56-64.
  24. Rai, A, Dubey, V, Chaturvedi, KK, and Malhotra, PK (2008). Design and Development of data mart for Animal Resources. Computers and Electronics in Agriculture, 64(2): 111-119.
  25. Rai, A, Dubey, V, Chaturvedi, KK and Malhotra, PK (2007). Issues of Design and Development of Agricultural Data Warehouse in India. CSI Communications, 31(1): 43-51.
  26. Rai, A, Malhotra, PK, Sharma SD and Chaturvedi, KK (2007). Data Warehousing for Agricultural Research – An Integrated Approach for Decision Making. Journal of Indian Society of Agricultural Statistics, 61(2): 264-273.
  27. Devraj, Chaturvedi, KK (2003). Internet for Technology Transfer in Agriculture. Agriculture Extension Review, March-April 2003. pp 3-6.
  28. Devraj, Chaturvedi, KK and Singh, P.K. (2001).Multimedia: An Emerging technology for Agricultural Extension. Agriculture Extension Review, Sept-Oct 2001. pp 3-8.

 
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