Dr. Sarika

Name

Dr. Sarika
Ongoing
  1. Characterisation of Genetic Resources: Germplasm Characterization and Trait Discovery in Wheat using Genomics Approaches and its Integration for Improving Climate Resilience, Productivity and Nutritional quality-Funded by DBT, Government of India
  2. Mainstreaming rice landraces diversity in varietal development through genome wide association studies: A model for large-scale utilization of gene bank collections of rice–Funded by DBT, Government of India
  3. Molecular markers for improving reproduction of cattle and buffaloes – Funded by Bill and Melinda Gates Foundation (BMGF)  
  4. Molecular characterization, development of molecular markers andmetabolite analysis of Tree bean (Parkia roxburghii) landraces of North-East India [BT/PR24912/NER/95/904/2017] – DBT Funded Project
  5. Explicating genomic insights of Indigenous equines breed population through computational genomics and artificial intelligence based approaches (Collaboration with ICAR-National Research Centre on Equine, Hisar) – Inter-Institutional Project
  6. Improving the usability of buffalo spermatozoa by sperm surface remodeling and immune acceptance in female reproductive tract-Funded by NASF, ICAR, New Delhi
  7. ICAR Network Project on Functional Genomics and Genetic Modification (Earlier ICAR-Network Project on Transgenic Crops)-Funded by ICAR
  8. Genome and transcriptome sequencing of coriander (Coriandrumsativum) to reveal insight of its genomic architecture and breeding targets-Funded by GSBM
  9. Development of web server for phenotype and genotype analysis for cattle breeding management (Collaboration with ICAR-Central Institute for Research on Cattle, Meerut)-Inter-Institutional Project
Completed
  1. Genomic data analysis to elucidate the regulatory network and candidate genes underlying cytoplasmic male sterility in pigeonpea (Collaboration with ICAR-Indian Institute of Pulses Research, Kanpur) – Funded by ICAR
  2. Deciphering genetic variation in the carbohydrate metabolism of farmed rohu families (Collaboration with ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar)- Funded by ICAR
  3. Computational approach for genomic resource improvement and precision phenotyping of less explored yield traits in wheat (Collaboration with ICAR-Indian Institute of Wheat and Barley Research, Karnal)- Funded by ICAR
  4. Computational and experimental biology approaches for delineation of selected secondary metabolyte pathways and antimicrobial peptides (AMPs) in major spices  (Collaboration with ICAR-Indian Institute of Spices Research, Kohzikode, Kerala)- Funded by ICAR
  5. Whole Genome sequencing and development of allied genomic research in two commercially important Fish – Labeorohita and Clariasbatrachus– DBT Funded Project (January 2014 to March 2018)
  6. Genomic data analysis for identification of economically important markers and viral diagnostics in pulses (Collaboration with ICAR-Indian Institute of Pulses Research, Kanpur) – Funded by ICAR (June 2015 to September 2017)
  7. Molecular and computational approach to delineate metabolic pathways for better carbohydrate utilization in Labeo spp. (Collaboration with ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar)- Funded by ICAR (June 2015 to September 2017)
  8. Computational approach for harnessing genome information and its integration with wheat phenome for efficient varietal development (Collaboration with ICAR-Indian Institute of Wheat and Barley Research, Karnal)- Funded by ICAR (June 2015 to September 2017)
  9. Mining and validation of candidate gene markers and screening on antimicrobial peptides of black pepper and small cardamom (Collaboration with ICAR-Indian Institute of Spices Research, Kohzikode, Kerala)- Funded by ICAR (June 2015 to September 2017)
  10. Establishment of National Agricultural Bioinformatics Grid in ICAR (April, 2013 to June 2014)-Funded By NAIP, ICAR
  11. Analysis and determination of antimicrobial peptides: A machine learning approach (November 2011 to March 2014)-Institute Funded
  12. Development of efficient estimation procedures for computation of compound growth rates in pulses (December 2008 to March 2011) –Institute Funded
  13. Development of on-line information retrieval system for AICRP on Chickpea plant breeding trial data (June 2009 to March 2011) –Institute Funded
  14. Modelling and forecasting of pulse production using auto regressive integrated moving average and artificial neural network methodology (December 2008 to March 2011) –Institute Funded
  15. Modelling and forecasting of pulse production using auto regressive integrated moving average and artificial neural network methodology (December 2008 to March 2011) –Institute Funded
E-mail

sarika[at]icar[dot]gov[dot]in
Designation

Senior Scientist
Awards
  1. Selected as Member, National Academy of Sciences (India), Allahabad in Biological Sciences for the year 2020.
  2. Received InSc Young Achiever Award 2020 from Institute of Scholars (InSc), Registered under Ministry of Ministry of Micro, Small and Medium Enterprise (MSME), Government of India
  3. Received OUTSTANDING SCIENTIST AWARD in the 4th International Scientist Award on Engineering, Science and Medicine by VDGOOD Professional Association (https://www.vdgood.org/)
  4. Received Associate, National Academy of Agricultural Sciences (NAAS), New Delhi from January 01, 2019
  5. Received “SESR Computational Biologist 2017” from Society for Educational and Scientific Research.
  6. Received “Distinguished Scientist Award” in recognition of meritorious and outstanding scientific contribution in the field of Bioinformatics of the Society for Bioinformatics and Biological Sciences, Allahabad in recognition of outstanding scientific contribution in the field of Bioinformatics during October 5-6, 2015.
  7. Received “Young Scientist Award” by Samgra Vikas Welfare Society for achievement and accomplishment in the field of Agriculture & Allied Sciences.
  8. Team Award: Received 3rd Prize for the research paper entitled “In silico gene prediction and their promoter analysis for the genes related to biotic stress in tomato (Solanum lycopersicum)” authored by G. Tandon, S. Jaiswal, M. A. Iquebal, S. Singh, A. Rai, D. Kumar at National Conference on Bioinformatics Panorama in Agriculture and Health (NCBPAH 2015) at SHIATS, Allahabad during October 5-6, 2015.
  9. BEST POSTER AWARD: Awarded FIRST in poster presentation on topic entitled “SBMDb: First whole genome based DNA microsatellite database of sugarbeet for bioenergy and industrial application” by M.A. Iquebal, Sarika, U.B. Angadi, Vasu Arora, Gaurav Sablok, Sunil Kumar, Anil Rai and Dinesh Kumar in 2nd National Conference on Converging Technologies Beyond 2020 (2CTB-2020) held during November 28-29, 2014 at UIET, Kurukshetra University, Kurukshetra, Haryana.
  10. BEST PAPER AWARD: Tandon, G., Jaiswal, S., Iquebal, M.A., Singh, S., Kumar, S., Rai, A. and Kumar, D. (2015). In silico study of interaction of EDS1 and PAD4 proteins in tomato using molecular dynamics approach.
  11. Best paper award in Proteomics Session in International Symposium on New Perspectives in Modern Biotechnology organized by Society for Applied Biotechnology, at Puducherry during March, 23-25, 2015.
  12. BEST PAPER AWARD: Kaur, S., Iquebal, M.A., Jaiswal, S., Singh, S., Rai, A., Kumar, D. (2015). In silico prediction and functional characterization of genes related to abiotic and biotic stresses in chickpea (Cicer arietinum)
  13. Best Paper Award in Genomics Session in International Symposium on New Perspectives in Modern Biotechnology  organized by Society for Applied Biotechnology, at Puducherry during March 23 – 25, 2015.
  14. First/ Best Research Paper Award: Iquebal, M.A., Sarika, Arora, V., Verma, N., Rai, A. and Kumar, D. (2012). World’s first whole genome based microsatellite DNA marker database of tomato: TomSatDb in National Conference on “NextGen Biotechnology: Amalgamating Science & Technology”, Department of Biotechnology Engineering, UIET, Kurukshetra University, Kurukshetra, Haryana during November 23-24, 2012.
  15. Received APPRECIATION LETTER from Dr. P Jayasankar, Director, ICAR-Central Institute of Freshwater Aquaculture, Bhubaneshwar for conducting collaborative workshop on “Bioinformatics Tools for Fish Genomics” during April 21-22, 2015.

Executive Member, Indian Society of Agricultural Statistics, IASRI, New Delhi

Member, Editorial Board, Computational Biology and Bioinformatics

Life Member of Scientific Societies:

  1. Indian Society of Agricultural Statistics, New Delhi
  2. Society for Bioinformatics and Biological Sciences, Allahabad
  3. Society for Educational and Scientific Research, Kerala
  4. Bioinformatics and Drug Discovery Society (BIDDS), Karaikudi, Tamil Nadu

  5. National Academy of Biological Sciences
Articles
  1. Kumar, Deepender, Kumar, Animesh, Chhokar, Vinod, Gangwar, O.P., Bhardwaj, S.C., Sivasamy, M, Sai Prasad, S.V., Sheoran, Sonia, Singh, Rajender, Sharma, Pradeep, Iquebal, M.A., Jaiswal, Sarika, Angadi, U.B., Singh, Gyanendra, Rai, Anil, Singh, G.P., Kumar, Dinesh, and Tiwari, Ratan (2020) Genome-wide association studies in diverse spring wheat panel for Stripe, Stem and Leaf rust resistance. Frontiers in Plant Science, (https://www.frontiersin.org/articles/10.3389/fpls.2020.00748/full)
  2.  Gautam, R.K., Singh, P.K., Venkatesan, K., Sakthivel, K., Zamir Ahmed, S.K., Swain, S., Devakumar, K., K. Shyam S. Rao, Meena, B.L., Iquebal M.A. and Jaiswal, Sarika (2020). Intra-varietal stability performance of popular rice landrace ‘C14-8’ in the Andaman Islands. Cereal Research Communications, 48, 103-111.
  3. Das, P., Joshi, C.G., Kushwaha, B., Kumar, D., Sahoo, L., Das, S.P., Bit, A., Shah, T.M., Hinsu, A.T., Patel, N., Patnaik, S., Agarwal, S., Pandey, M., Srivastava, S., Meher, P.K., Jayasankar, P, Koringa, P.G., Nagpure, N.S., Kumar, R., Singh, M., Iquebal, M.A., Jaiswal, S., Kumar, N., Raza, M., Mahapatra, K.D. and Jena, J.K. (2020). De novo assembly and genome-wide SNP discovery in rohu carp, Labeo rohita. Frontiers in Genetics. (https://www.frontiersin.org/articles/10.3389/fgene.2020.00386/full).
  4.  Jaiswal, Sarika, Gautam, R K., Singh, R K., Krishnamurthy S. L., Ali, S., Sakthivel, K., Iquebal, Mir A., Rai, Anil, Kumar, Dinesh (2019). Harmonizing technological advances in phenomics and genomics for enhanced salt tolerance in rice from a practical perspective. Rice Journal, 12, Article number: 89 (2019)(https://thericejournal.springeropen.com/articles/10.1186/s12284-019-0347-1)
  5.  Kumar, Deepender, Chhokar, Vinod, Singh, Rajender, Sheoran, Sonia, Sharma, Pradeep, Jaiswal, Sarika, Iquebal, M.A., Jaiswar, Akanksha, Jaisri, J, Angadi, U.B., Rai, Anil, Singh, G.P., Kumar, Dinesh, Tiwari, Ratan (2019). Characterization of genetic diversity and population structure in wheat using array based SNP markers. Molecular Biology Reports, 47, 293–306. https://link.springer.com/article/10.1007/s11033-019-05132-8
  6.  Iquebal, M.A., Sharma, Pradeep, Jaiswal, Sarika, Jasrotia, Rahul Singh, Kaur, Amandeep, Siroha, Monika, Angadi, U.B., Sheoran, Sonia, Singh Rajender, Singh, G.P., Rai, Anil, Tiwari, Ratan, Kumar, Dinesh (2019). RNAseq analysis reveals drought-responsive molecular pathways with candidate genes and putative molecular markers in root tissue of wheat. Scientific Reports (Nature Group of Journal), 9, Article number: 13917 (https://www.nature.com/articles/s41598-019-49915-2)  
  7.  Ali, Abid, Kumar, Rakesh, Iquebal, Mir Asif, Jaiswal, Sarika, Kumar, Dinesh and khan, Asad (2019). Role of conserved residues in catalytic activity of NDM-1: an approach of site directed mutagenesis and molecular dynamics. Physical Chemistry Chemical Physics-a Journal of Royal Society of Chemistry, 21, 17821–17835 (https://pubs.rsc.org/en/content/articlelanding/2019/cp/c9cp02734c/unauth#!divAbstract)
  8.  Rasal, Kiran D., Iquebal, Mir Asif, Pandey, Amrendra, Behera, Parmeswari, Jaiswal, Sarika, Vasam, Manohar, Dixti, Sangita, Raza, Mustafa, Sahoo, L., Nandi, Samiran, Angadi, UB, Rai, Anil, Kumar, Dinesh Nagpure, Naresh, Chaudhari, Aparna and Sundaray, Jitendra Kumar (2020) Revealing liver specific microRNAs linked with carbohydrate metabolism of farmed carp,  Labeo rohita (Hamilton, 1822).  Genomics, 112 (1),32-44 (https://www.sciencedirect.com/science/article/pii/S088875431930237X?via%3Dihub).
  9.  Rasal, Kiran D., Iquebal, Mir Asif, Jaiswal, Sarika, Dixit, Sangita, Vasam, Manohar, Nandi, Samiran, Raza, Mustafa, Sahoo, Lakshman, Angadi, UB, Rai, Anil, Kumar, Dinesh, and Sundaray, Jitendra Kumar Sundaray (2019). Liver specific microRNAs identification in farmed carp, Labeo bata (Hamilton, 1822) fed with starch diet using high-throughput sequencing. Marine Biotechnology, 21, 589–595 (https://link.springer.com/article/10.1007/s10126-019-09912-y)
  10.  Kumar, Sunil, Dehury, Budheswar, Tandon, Gitanjali, Jaiswal, Sarika, Iquebal, Mir Asif, Ahmad,  Khurshid, Nagrale, Dipak T, Jha, Yachna, Singh, Mahender Kumar, Singh, Udai B.,  Singh,  Arjun, Rai, Anil, Kumar, Dinesh (2019). An insight into molecular interaction of PGIP with PG for banana cultivar. Frontiers in Bioscience, Landmark, 25, 335-362.
  11.  Jasrotia, Rahul Singh, Jaiswal, Sarika, Yadav, Pramod Kumar, Iquebal, Mir Asif, Rai, Anil and Kumar Dinesh (2019) Genome-wide analysis of HSP70 family protein in Vigna radiata and co-expression analysis under abiotic and biotic stress. Journal of Computational Biology. 26, 1-13. https://www.liebertpub.com/doi/abs/10.1089/cmb.2019.0166
  12.  Negi, Ankita, Jasrotia, Rahul Singh, Jaiswal, Sarika, Angadi, U.B., Iquebal, M.A., George, Johnson K, Rai, Anil and Kumar, Dinesh (2019). De-novo transcriptome assembly for discovery of putative microsatellite markers and transcription factors in black pepper (Piper nigrum L.). Indian Journal of Agricultural Sciences. 89(7), 1121-1125.
  13.  Khan, Aamir, Johnson, George K, Jasrotia, Rahul Singh, Aravind, Sharon, Angadi, U. B., Iquebal, M.A., Manju KP, Jaiswal, Sarika, Umadevi P., Rai, Anil, Kumar, Dinesh (2020) Plant Virus Interaction Mechanism and Associated Pathways in Mosaic Disease of Green Cardamom (Elettaria cardamomum Maton) by RNA-Seq Approach. Genomics, 112(2),2041-2051.(https://www.sciencedirect.com/science/article/pii/S08             88754319309218)
  14.  Jasrotia, Rahul Singh, Yadav, Pramod Kumar, Iquebal, Mir Asif, Bhatt, S.B., Arora, Vasu, Angadi, U.B., Tomar Rukam Singh, Jaiswal, Sarika, Rai, Anil, Kumar, Dinesh (2019). VigSatDB: Genome wide microsatellite DNA marker database of three species of Vigna for germplasm characterization and improvement. Database: The Journal of Biological Databases and Curation. 2019, 1-13. (https://academic.oup.com/database/article/doi/10.1093/database/baz055/5506750)
  15.  Sheoran, Sonia, Jaiswal Sarika, Kumar, Deepender, Raghav, Nishu, Sharma, Ruchika, Pawar, Sushma, Paul, Surinder, Iquebal, M.A., Jaiswar, Akanksha, Sharma, Pradeep, Singh, Rajender, Singh, CB Gupta, Arun, Kumar, Neeraj, Angadi, U.B., Rai, Anil, Singh, G.P., Kumar, Dinesh, Tiwari, Ratan (2019). Uncovering genomic regions associated with 36 agro-morphological traits in Indian spring wheat using GWAS. Frontiers in Plant Science, 10,Article 527. (https://www.frontiersin.org/articles/10.3389/fpls.2019.00527/full)
  16.  Singh, Rajender, Iquebal, MA, Mishra, CN, Jaiswal, Sarika, Kumar, Deepender, Raghav, Nishu, Paul, Surinder, Sheoran, Sonia, Sharma, Pradeep, Gupta, Arun, Tiwari, Vinod, Angadi, UB, Kumar, Neeraj, Rai, Anil, Singh, GP, Kumar, Dinesh and Tiwari, Ratan (2019) Development of model web-server for crop variety identification using throughput SNP genotyping data. Scientific Reports (Nature Group of Journal). (https://www.nature.com/articles/s41598-019-41204-2)
  17. Jaiswal, Sarika, Iquebal, M.A., Arora, Vasu, Angadi, U.B., Khokar, R.S., Sharma, Pradeep, Sheoran, Sonia, Singh, G.P., Rai, Anil, Kumar, Tiwari, Ratan, Dinesh (2019). Development of species specific putative miRNA and its target prediction tool in wheat (Triticum aestivum L.). Scientific Reports, https://www.nature.com/articles/s41598-019-40333-y DOI : 10.1038/s41598-019-40333-y
  18.  Rasal, Kiran D., Iquebal, Mir Asif, Jaiswal, Sarika, Dixit, Sangita, Vasam, Manohar, Nandi, Samiran, Raza, Mustafa, Sahoo, Lakshman, Angadi, UB, Rai, Anil, Kumar, Dinesh, and Sundaray, Jitendra Kumar Sundaray (2019). Liver specific microRNAs identification in farmed carp, Labeo bata (Hamilton, 1822) fed with starch diet using high-throughput sequencing. Marine Biotechnology (https://link.springer.com/article/10.1007/s10126-019-09912-y)
  19.  Rasal, Kiran D., Iquebal, Mir Asif, Pandey, Amrendra, Behera, Parmeswari, Jaiswal, Sarika, Vasam, Manohar, Dixti, Sangita, Raza, Mustafa, Sahoo, L., Nandi, Samiran, Angadi, UB, Rai, Anil, Kumar, Dinesh Nagpure, Naresh, Chaudhari, Aparna and Sundaray, Jitendra Kumar (2019) Revealing liver specific microRNAs linked with carbohydrate metabolism of farmed carp, Labeo rohita (Hamilton, 1822). Genomics (https://www.sciencedirect.com/science/article/pii/S088875431930237X?via%3Dihub).
  20.  Jaiswal, Sarika, Gautam, R K., Singh, R K., Krishnamurthy S. L., Ali, S., Sakthivel, K., Iquebal, Mir A., Rai, Anil, Kumar, Dinesh (2019). Harmonizing technological advances in phenomics and genomics for enhanced salt tolerance in rice from a practical perspective. Rice Journal. (https://thericejournal.springeropen.com/articles/10.1186/s12284-019-0347-1)
  21.  Kumar, Deepender, Chhokar, Vinod, Singh, Rajender, Sheoran, Sonia, Sharma, Pradeep, Jaiswal, Sarika, Iquebal, M.A., Jaiswar, Akanksha, Jaisri, J, Angadi, U.B., Rai, Anil, Singh, G.P., Kumar, Dinesh, Tiwari, Ratan (2019). Characterization of genetic diversity and population structure in wheat using array based SNP markers. Molecular Biology Reports https://link.springer.com/article/10.1007/s11033-019-05132-8
  22.  Ali, Abid, Kumar, Rakesh, Iquebal, Mir Asif, Jaiswal, Sarika, Kumar, Dinesh and khan, Asad (2018). Role of conserved residues in catalytic activity of NDM-1: an approach of site directed mutagenesis and molecular dynamics. Physical Chemistry Chemical Physics-a Journal of Royal Society of Chemistry. (https://pubs.rsc.org/en/content/articlelanding/2019/cp/c9cp02734c/unauth#!divAbstract)
  23.  Jasrotia, Rahul Singh, Jaiswal, Sarika, Yadav, Pramod Kumar, Iquebal, Mir Asif, Rai, Anil and Kumar Dinesh (2019) Genome-wide analysis of HSP70 family protein in Vigna radiata and co-expression analysis under abiotic and biotic stress. Journal of Computational Biology. https://www.liebertpub.com/doi/abs/10.1089/cmb.2019.0166
  24.  Kumar, Sunil, Dehury, Budheswar, Tandon, Gitanjali, Jaiswal, Sarika, Iquebal, Mir Asif, Ahmad,  Khurshid, Nagrale, Dipak T, Jha, Yachna, Singh, Mahender Kumar, Singh, Udai B.,  Singh,  Arjun, Rai, Anil, Kumar, Dinesh (2019). An insight into molecular interaction of PGIP with PG for banana cultivar. Frontiers in Bioscience, Landmark, 25, 335-362.
  25.  Mukherjee, Sabyasachi, Mukherjee, Anupama, Singh, Rahul Jasrotia, Jaiswal, Sarika, Iquebal, Mir Asif, Longkumer, Imsusosang, Mech, Moonmoon, Vupru, Kezhavituo, Khate, Kobu, Rajkhowa, Chandan, Mitra, Abhijit, Rai, Anil and Kumar, Dinesh (2019). Muscle transcriptome signature and gene regulatory network in two divergent lines of a semi-domesticated bovine Mithun (Bos frontalis). Genomics (Elsevier Journal) (https://doi.org/10.1016/j.ygeno.2019.02.004)
  26. Jaiswal, Sarika, Jadhav, Pravin V., Jasrotia, Rahul Singh, Kale, Prashant B., Kad, Snehal  K., Moharil, Mangesh P., Dudhare, Mahendra S., Deshmukh, Amit G., Mane, Shyamsundar S., Nandanwar, Ravindra S., Penna, Suprasanna, Manjaya, Joy G., Iquebal, Mir Asif, Tomar, Rukam Singh, Rai, Anil, Kumar, Dinesh (2018). Transcriptomic signature reveals mechanism of flower bud distortion in witches’-broom disease of soybean (Glycine max). BMC Plant Biology (https://bmcplantbiol.biomedcentral.com/articles/10.1186/s12870-018-1601-1)
  27.  Das, Ritwika, Arora, Vasu, Jaiswal, Sarika, Iquebal, MA, Angadi, UB, Singh, Rakesh, Shil, Sandip, Rai, Anil and Kumar Dinesh (2018). PolyMorphPredict: Web server for rapid polymorphic SSR locus discovery from whole genome and transcriptome data. Frontiers in Plant Sciences. https://www.frontiersin.org/articles/10.3389/fpls.2018.01966/full
  28.  Arora, Vasu, Kapoor, Neera, Fatma, Samar, Jaiswal, Sarika, Iquebal, Mir Asif, Rai, Anil and Kumar, Dinesh (2018). BanSatDB: Whole genome based database of putative and experimentally validated microsatellite markers of three Musa spp. Crop Journal, 18(6), 642-650. https://www.sciencedirect.com/science/article/pii/S2214514118300205
  29.  Jaiswal, Sarika, Antala, Tushar J., Kheni, Jashminkumar, Chopra, Meenu, Mandavia, M. K., Tomar, Rukam S., Jasrotia, Rahul Singh, Iquebal, M.A., Angadi, U.B., Rai, Anil, Kumar, Dinesh (2018) Transcriptomic signature of drought response in pearl millet (Pennisetum glaucum (L.) and development of web-genomic resources. Scientific Reports: 8, 3382 https://www.nature.com/articles/s41598-018-21560-1.
  30.  Jasrotia, Rahul Singh, Iquebal, Mir Asif, Yadav, Pramod Kumar, Kumar, Neeraj, Jaiswal, Sarika, Angadi, Ulavappa B., Rai, Anil, Kumar, Dinesh (2017). Development of transcriptome based web genomic resources of yellow mosaic disease in Vigna mungo. Physiology and Molecular Biology of Plants, 23(4), 767-777. (https://link.springer.com/article/10.1007/s12298-017-0470-7)
  31. Iquebal, Mir A, Jaiswal, Sarika, Mahato, Ajay K, Jayaswal, Pawan K, Angadi, U.B., Kumar, Neeraj, Sharma, Nimisha, Singh, Anand, Srivastav, Manish, Praksh, Jai, Singh, Sanjay K, Khan, Kasim, Mishra, Rupesh K, Rajan, Shailendra, Bajpai, Anju, Sandhya, BS, Nischita, Puttaraju, Ravishankar, KV, Dinesh, MR, Rai, Anil,  Kumar, Dinesh, Sharma, Tilak R., Singh, Nagendra K.  (2017). MiSNPDb: a web based genomic resources of tropical ecology fruit mango (Mangifera indica L.) for phylogeography and varietal differentiation. Scientific Reports, 7, 14968 (2017) https://www.nature.com/articles/s41598-017-14998-2
  32.  Jaiswal, Sarika, Sheoran, Sonia, Arora, Vasu, Angadi, U.B., Iquebal, M.A., Raghav, Nishu, Aneja, Bharti, Kumar Deepender, Khokar, R.S., Sharma, Pradeep, Singh, G.P., Rai, Anil, Tiwari, Ratan, Kumar, Dinesh. (2017). Putative Microsatellite DNA Marker-Based Wheat Genomic Resource for Varietal Improvement and Management. Frontiers in Plant Sciences.  https://www.frontiersin.org/articles/10.3389/fpls.2017.02009/full
  33. Iquebal, Mir A., Tomar, Rukam Singh, Parakhia, M.V., Singla, Deepak, Jaiswal, Sarika, Rathod, V.M., Padhiyar, S.M., Kumar, Neeraj, Rai, Anil, and Kumar, Dinesh. (2017) Draft whole genome sequence of groundnut stem rot fungus Athelia rolfsii revealing genetic architect of its pathogenicity and virulence. Scientific Reports, 7, 5299 (2017) (https://www.nature.com/articles/s41598-017-05478-8)
  34.  Tandon, G., Singh, S., Kaur, S., Sarika, Iquebal, M.A., Rai, A., Kumar, D. (2017). Computational deciphering of biotic stress associated genes in tomato (Solanum lycopersicum). Genomics Data, 14, 82-90. (http://www.sciencedirect.com/science/article/pii/S2213596016301763)
  35. Kaur, Sukhdeep, Singh, Satendra, Tandon Gitanjali, Jaiswal Sarika, Iquebal, Mir Asif, Rai, Anil and Kumar, Dinesh (2017). In silico prediction and functional characterization of genes related to abiotic and biotic stresses in chickpea (Cicer arietinum). American Journal of Bioinformatics. http://thescipub.com/pdf/10.3844/ofsp.11447
  36.  Gautam, R.K., Singh, P.K., Venkatesan, K., Sakthivel, K., Zamir Ahmed, S.K., Swain, S., Devakumar, K., K. Shyam S. Rao, Meena, B.L., Iquebal M.A. and Jaiswal, Sarika (2019). AMMI model mediated stability performance of intra-varietal selections in a popular rice landrace in the Andaman Islands. Cereal Research Communications. (Accepted for Publication)
  37. Arora, Vasu, Kapoor, Neera, Fatma, Samar. Jaiswal, Sarika, Iquebal, Mir Asif, Rai, Anil and Kumar, Dinesh (2017). Musa Information Resources: Biodiversity, disease and pest management database. Asian Journal of Biological and Life Sciences. 6(2), 385-388.http://pbsjournals.com/ajbls/archview.php?id=308&jid=Short%20Communication
  38.  Iquebal, M.A., Prajneshu, Sarika (2016). Application of data reduction technique in agriculture: A functional approach. International Journal of Agricultural and Statistical Sciences, 12(S1), 209-213.
  39. Jaiswal, Sarika, Dhanda, S.K., Iquebal, M.A., Arora, Vasu, Shah, Tejas M., Angadi, U.B., Joshi, Chaitanya G., Rahgava, G.P.S., Rai, Anil and Kumar, Dinesh (2016). BIS-CATTLE: A Web Server for Breed Identification using Microsatellite DNA Markers. American Journal of Bioinformatics, 5(1), 10-17.http://thescipub.com/abstract/10.3844/ofsp.10407
  40.  Verma, Sandeep Kumar, Jasrotia, Rahul Singh, Iquebal, M.A., Jaiswal, Sarika, Angadi, U.B., Rai, Anil and Kumar, Dinesh (2017). Deciphering genes associated with root wilt disease of coconut and development of its transcriptomic database (CnTDB). Physiological and Molecular Plant Pathology. 100, 255-267.http://www.sciencedirect.com/science/article/pii/S0885576517300693
  41.  Singh, Nagendra K, Mahato, Ajay K,Jayaswal, Pawan K, Singh, Akshay, Singh, Sangeeta, Singh, Nisha, Rai, Vandna, Amitha Mithra S V, Gaikwad, Kishor, Sharma, Nimisha, Lal, Shiv, Srivastava, Manish, Praksh, Jai, Kalidindi, Usha, Singh, Sanjay K, Singh, Anand K, Khan, Kasim, Mishra, Rupesh K, Rajan, Shailendra, Bajpai, Anju, Sandhya, BS, Nischita, Puttaraju, Ravishankar, KV, Dinesh, MR, Kumar, Neeraj, Jaiswal, Jaiswal, Sarika, Iquebal, Mir A, Kumar, Dinesh, Rai, Anil  and Sharma, Tilak R (2016). Origin, Diversity and Genome Sequence of Mango (Mangifera indica L.). Indian Journal of History of Science, 51(2), 355-368.
  42.  Sharma, Pradeep, Tiwari, Ratan, Saharan, M.S., Sharma, Indu, Kumar, Jitender, Mishra, Shefali, Muthusamy, Senthilkumar K., Gupta, R.K., Jaiswal, Sarika, Iquebal, Mir Asif, Angadi, U.B., Kumar, Neeraj, Fatma, Samar, Rai, Anil, Kumar, Dinesh (2016) Draft Genome Sequence of the Karnal Bunt fungus, Tilletia indica Mitra: Two monosporidial lines (PSWKBGH-1 and 2). Genome Announcement, 4(5):e00928-16. doi:10.1128/genomeA.00928-16.
  43.  Taxak, Pooja Choudhary, Malhotra, Suruchi M, Bharadwaj, C, Gaikwad, Kishor, Kaur, Sukhdeep, Chopra, Meenu, Tandon, Gitanjali, Jaiswal, Sarika, Iquebal, Mir A, Kumar, Dinesh, Srinivasan, Jain, Pradeep K. (2017). Transcriptomic signature of fusarium toxin in chickpea unveiling wilt pathways and marker discovery. Physiological and Molecular Plant Pathology, 100, 163-177.
  44.  Iquebal, Mir Asif, Soren, Khela Ram, Gangwar, Priyanka, Shanmugavadevel, P S, Aravind K, Singla, Deepak, Jaiswal, Jasrotia, Rahul Singh, Sarika, Chaturvedi, Sushil K, Singh, NP, Varshney, Rajeev K, Rai, Anil, Kumar, Dinesh (2017). Discovery of herbicide resistance genes and its regulatory network in chickpea using transcriptome sequencing. Frontiers in Plant Science, 8:958. doi: 10.3389/fpls.2017.00958 (https://www.frontiersin.org/articles/10.3389/fpls.2017.00958/full)
  45.  Gautam, Aditi, Sharma, Asuda,  Sarika, Fatma, Samar, Arora, Vasu, Iquebal, M.A., Nandi, S., Sundaray, J.K., Jayasankar, J., Rai, Anil, Kumar, Dinesh (2016). Development of antimicrobial peptide prediction tool for aquaculture industries. Probiotics and AntimicrobialProteins,8(3),141-149. http://link.springer.com/article/10.1007%2Fs12602-016-9215-0
  46. Shukla, Shantanu Shukla, Iquebal, MA, Jaiswal, Sarika, Angadi, UB, Fatma, Samar, Kumar, Neeraj, Jasrotia, Rahul S, Fatima, Yasmin, Rai, Anil, Kumar, Dinesh (2016) The Onion Genomic Resource: A Genomics and Bioinformatics driven resource for onion breeding. Plant Gene, 8: 9-15.http://www.sciencedirect.com/science/article/pii/S2352407316300166
  47.  Kaur, Sukhdeep, Iquebal, M.A., Sarika, Tandon, Gitanjali, Sundaram, R.M., Gautam, R.K., Suresh, K.P., Rai, Anil and Kumar, Dinesh (2016). A meta-analysis of potential candidate gene selection for salinity stress tolerance in rice. Agrigene, 1, 126-134.http://www.sciencedirect.com/science/article/pii/S2352215116300113
  48.  Shinde, Manisha P., Upadhyay, Anuradha, Jaiswal, Sarika, Iquebal, Mir A., Upadhyay, Ajay K. (2015). Identification, characterization and expression analysis of salt stress responsive ERF transcription factor VvERF1 in grapevine var. Thompson Seedless. Vitis-Journal of Grapevine Research, 55, 165-171. https://ojs.openagrar.de/index.php/VITIS/article/view/6236
  49.  Das, Sofia, Bit, Amrita, Patnaik, Siddhi, Sahoo, Lakshman, Meher, Prem, Saha, T., Patel, A., Patel, Namrata, Koringa, Prakash, Joshi, Chitanya, Agarwal, Suyash, Pandey, Manmohan, Srivastava, Shreya, Kushwaha, B., Kumar, Ravindra, Nagpure, Naresh, Iquebal, M.A., Jaiswal, Sarika, Kumar, Dinesh, Jayasankar, P., Jena, J., and Das, Paramananda (2015). Low depth shotgun sequencing resolves complete mitochondrial genome sequence of Labeo rohita. Mitochondrial DNA, 27(5), 3517-3518.http://informahealthcare.com/doi/abs/10.3109/19401736.2015.1074197
  50. Kushwaha, B., Kumar, R., Agarwal, S., Pandey, M., Nagpure, N.S., Singh, M., Srivastava, S., Joshi, C.G., Das, P., Shah, T.M., Patel, A.B., Patel, N., Koringa, P, Das, S.P., Patnaik, S., Bit, A., Sarika, Iquebal, M.A., Kumar, D. and Jena, J.K. (2015). Assembly and variation analyses of C. batrachus mitogenome retrieved from WGS data and its phylogenetic relationship with other catfishes. Meta Gene, 5, 105-114.
  51.  Iquebal, M.A., Sarika, Angadi, U.B., Sablok, Gaurav, Arora, Vasu, Kumar, Sunil, Rai, Anil and Kumar, Dinesh (2015). SBMDb: First whole genome microsatellite DNA marker database of sugar beet for bioenergy and industrial applications. Database: The Journal of Biological Databases and Curation (http://database.oxfordjournals.org/content/2015/bav111)
  52.  Iquebal, MA, Sarika and Rai, Anil (2015). Classification and identification of cattle antimicrobial peptides using Artificial Neural Network methodology. International Journal of Agricultural & Statistical Sciences, 10(S1), 275-281.
  53.  Tandon, Gitanjali, Sarika, Iquebal, M.A., Kumar, Sunil, Kaur, Sukhdeep, Rai, Anil and Kumar, Dinesh. (2015). Evidence of Salicylic Acid pathway with EDS1 and PAD4 proteins by molecular dynamics simulation for Grape improvement. Journal of Biomolecular Structure and Dynamics, 33(10), 2180-2191http://www.tandfonline.com/doi/full/10.1080/07391102.2014.996187
  54.  Sarika, Iquebal, MA, Arora, Vasu, Rai, Anil and Kumar Dinesh. (2015). Species specific approach for development of web-based antimicrobial peptides prediction tool. Computers and Electronics in Agriculture, 111, 55-61.
  55.  Iquebal, M.A., Muhammad Shahid, Sarika, S. P. Dixit, N. K. Verma, R. A. K. Aggarwal, S. Jayakumar, Anil Rai and Dinesh Kumar (2014). Loci minimization in breed prediction using Artificial neural network approach. Animal Genetics. 45 (6), 898-902.
  56.  Iquebal, M.A., Prajneshu and Sarika (2014). Nonlinear Support Vector Regression Technique for Modelling and Forecasting: An Application. Journal of Indian Society of Agricultural Statistics, 68 (3), 369-374.
  57. Iquebal, M.A., Sarika, Arora, Vasu, Rai, Anil and Kumar Dinesh. (2013). In-silico mining of microsatellite markers from goat whole genome and development of GoSatDb. Indian Journal of Animal Research. (Accepted for Publication).
  58. Sarika, Iquebal, M.A., Rai, Anil and Anshika (2013). Support vector machine for prediction of antimicrobial peptides in legumes. International Journal of Agricultural & Statistical Sciences, 9 (2), 717-728.
  59.  Iquebal MA, Sarika,   Dhanda, SK, Arora V, Dixit, SP, Raghava GPS, Rai A and Kumar D (2013). Development of a model webserver for breed identification using microsatellite DNA marker. BMC Genetics 2013, 14:118. (http://www.biomedcentral.com/1471-2156/14/118/abstract).
  60.  Iquebal MA, Sarika, Arora Vasu, Verma Nidhi, Rai Anil and Kumar Dinesh (2013). First whole genome based microsatellite DNA marker database of tomato for mapping and variety identification. BMC Plant Biology 2013, 13:197. (http://www.biomedcentral.com/1471-2229/13/197/abstract).
  61.  Iquebal, M.A. and Sarika. (2013). Nonlinear growth models for describing country’s Lentil (Lens culinaris M.) production. Journal of Food Legume, 26(1&2), 79-82.
  62. Sarika, Arora, Vasu, Iquebal, M.A., Rai, Anil, and Kumar, Dinesh (2013). PIPEMicroDB: Microsatellite database and primer generation tool for pigeonpea genome. Database: The Journal of Biological Databases and Curation. Vol. 2013, Article ID bas054, doi:10.1093/database/bas054
  63.  Bajetha, Garima, Bhati, Jyotika, Sarika, Iquebal, M. A., Rai, Anil, Arora, Vasu and Kumar, Dinesh (2013). Analysis and functional annotation of expressed sequence tags of Water Buffalo, Animal Biotechnology. 24 (1), 25-30. (http://www.tandfonline.com/doi/pdf/10.1080/10495398.2012.737884)
  64.  Sarika, Arora, Vasu, Iquebal, M.A., Rai, Anil, Bajetha, Garima and Kumar, Dinesh (2013). In silico mining of putative microsatellite markers from whole genome sequence of water buffalo (Bubalis bubalis) and development of first BuffSatDB. BMC Genomics. 14, 43 (19 January, 2013) (http://www.biomedcentral.com/1471-2164/14/43/abstract)
  65. Sarika, Iquebal, M. A. and Rai, Anil (2012). Biotic stress resistance in agriculture through antimicrobial peptides. Peptides: An International Journal, 36, 322-330.
  66.  Sarika, Iquebal, M. A. and Rai, Anil (2012). In silico analysis and homology modelling of antioxidant proteins in legumes. Online Journal of Bioinformatics, 13(1), 120-129.
  67.  Sewak, Shiv, Iquebal, M. A., Singh, N. P., Solanki, R. K. and Sarika (2012). Genetic diversity studies in chickpea (Cicer arietinum) germplasm (2006-07). Journal of Food Legumes, 25 (1) 31-36.
  68. Sarika and Iquebal, M. A. (2011). Modelling and forecasting of pigeonpea (Cajanus cajan) production in Orissa using ARIMA methodology. Indian Journal of Applied Statistics, 11, 27-29.
  69. Yadav, N. K., Sarika, Iquebal, M. A. and Akram, Mohd. (2011). In-silico analysis and homology modelling of coat protein of Mungbean yellow mosaic India virus. Journal of Food Legumes, 24 (2), 138-141.
  70. Sarika, Iquebal, M. A. and Chattopadhyay, C. (2011). Modelling and forecasting of pigeonpea (Cajanus cajan) in India using ARIMA methodology. Indian Journal of Agricultural Sciences, 81 (6), 520-523.
  71. Sarika, Mohd. Akram, Iquebal, M. A. and Naimuddin (2010). Determination of MHC Binding Peptides and Epitopes from Non-Structural Movement (NSm) Protein of Groundnut Bud Necrosis Virus. Current Drug Discovery Technologies (Bentham Science Publishers), 7 (2), 117-122.
  72.  Sarika, Mohd. Akram, Iquebal, M. A. and Naimuddin, K (2010). Prediction of MHC Binding Peptides and Epitopes from coat protein of Mungbean yellow mosaic India virus-Ub05. Journal of Proteomics and Bioinformatics (OMICS Publishing Groups), 3 (5), 173-178.
  73.  Sarika, Jaggi, Seema and Sharma, VK (2009). Second order response surface model with neighbour effects. Communications in Statistics – Theory and Methods, 38(9), 1393–1403.
  74.  Sarika, Seema Jaggi and V.K. Sharma (2013). First order rotatable designs incorporating neighbour effects. ARS Combinatoria, 112, 145-159.
  75. Jaggi, Seema, Sarika and Sharma, VK (2010). Response surface analysis incorporating neighbour effects from adjacent units. Indian Journal of Agricultural Sciences, 80(8), 719-723.
  76.  Kaur C, Walia S, Nagal S,Walia S, Singh J, Singh BB,Saha S, Singh B, Kalia P, Jaggi S and Sarika.(2013). Functional quality and antioxidant composition of selected tomato (Solanum lycopersicon L) cultivars grown in Northern India. LWT – Food Science and Technology, 50,139-145.
  77. Koley, Tanmay, Kaur, Charanjit, Nagal, Shweta, Walia, Shweta, Jaggi, Seema, Sarika (2016) Antioxidant activity and phenolic content in genotypes of Indian jujube (Zizyphus mauritiana Lamk.). Arabian Journal of Chemistry, 9 (2), 1044-1052.
  78. Kaur, Charanjit, Pal, R.K., Kar, Abhijit, Gadi, Chirag, Sen, Sangita, Kumar, Praveen, Chandra, Ram, Jaiswal, Sarika, Khan, Islam. (2014). Characterization of antioxidants and hypoglycemic potential of pomegranate grown in India: A preliminary investigation. Journal of Food Biochemistry, 38 (4), 397-406
  79.  T Sahoo, MK Verma, SK Singh, M Thakre, RR Sharma, S Jaiswal. Heterosis and heterobeltiosis for morpho-physical, phenolics, flavonoids and antioxidants in grape (Vitis vinifera) hybrids. Indian Journal of Agricultural Sciences, 87 (6), 759-764.
  80. Charanjit Kaur, Suresh Walia, Shweta Nagal, Shweta Walia, Jashbir Singh, Braj Bhusan Singh, Supradip Saha, Balraj Singh, Pritam Kalia, Seema Jaggi and Sarika. (2013). Functional quality and antioxidant composition of selected tomato (Solanum lycopersicon L) cultivars grown in northern India. LWT – Food Science and Technology, 50, 139-145.(http://www.sciencedirect.com/science/article/pii/S0023643812002708)
  81.  Rudra, SG, Jakhar, N, Nishad, J, Saini, N, Sen, S, Bhardhwaj, R, Jaiswal, S, Suneja, P, Singh, S and Kaur, C (2015). Extrusion conditions and antioxidant properties of sorghum, barley and horse gram based snack. International Journal of Plant Research, 28(2), 171-182.
  82.  Kaur C., Pal, R.K., Kar A., Gadi C, Sen S, Kumar P, Chandra R, Sarika and Islam Khan. (2014). Characterization of Antioxidants and Hypoglycemic Potential of Pomegranate Grown in India – A Preliminary Investigation. Journal of Food Biochemistry, 38(4), 397-406.
  83.  Charanjit Kaur, Shweta Nagal, Jyoti Nishad, Ravinder Kumar and Sarika (2014). Evaluating eggplant (Solanum melongena L) genotypes for bioactive properties: A chemometric approach. Food Research International, 60, 205-211 (In press; Available online at http://authors.elsevier.com/sd/article/S096399691300536X
  84.  Tanmay Kumar Koley, Shweta Walia, Shweta Nagal, Charanjit. Kaur, Seema Jaggi, Sarika. (2011). Antioxidant activity and lycopene content of some promising cultivars of Indian tomato. Journal of Food Biochemistry
  85.  Tanmay Kumar Koley, Charanjit Kaur, Shweta Nagal, Shweta Walia, Seema Jaggi, Sarika. (2011). Antioxidant and phenolic content in genotypes of Indian jujube (Zizyphus mauritiana Lamk). Arabian Journal of Chemistry
  86. Eldho Varghese, Seema Jaggi and Sarika (2013). Response surface model with neighbor effects and correlated observations. Model Assisted Statistics and Applications, 8(1): 41-49.
  87.  Jaggi Seema, Sarika and Sharma, V. K. (2010). Response Surface Analysis Incorporating Neighbour effects from Adjacent Units. Indian Journal of Agricultural Sciences,80(8), 1719-1723.
  88.  Jaggi Seema, Sarika and Sharma, V. K. (2008). First Order Rotatable Designs Incorporating Neighbour effects. ARS Combinatorials. (Under print).
  89. Sarika, Jaggi Seema and Sharma, V. K. (2009). Second Order Response Surface Model with Neighbour Effects. Communications in Statistics- Theory and Methods. 38(9),1393-1403. (Online Publication from 1 January, 2009).
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